miRBase entry: ggo-mir-133a

Stem-loop ggo-mir-133a

Accession

MI0002528

Description

Gorilla gorilla ggo-mir-133a precursor miRNA

Gene family

MIPF0000029; mir-133

Sequence

acaaugcuuugcuagagcugguaaaauggaaccaaaucgccucuucaauggauUUGGUCCCCUUCAACCAGCUGUagcuaugcauuga
.((((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...)))))).

Structure

a      uuu    g       aa  u  a        gccuc 
 caaugc   gcua agcuggu  aa gg accaaauc     u
 ||||||   |||| |||||||  || || ||||||||      
 guuacg   cgaU UCGACCA  UU CC UGGUUuag     u
a      uau    G       AC  C  C        guaac

Annotation confidence Not enough data

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Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr18: 18373316-18373403 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-133a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-133a

Accession	MIMAT0002239
Description	Gorilla gorilla ggo-miR-133a mature miRNA
Sequence	54 - UUGGUCCCCUUCAACCAGCUGU - 75
Evidence	not_experimental

References

PubMed ID: 15652478
Phylogenetic shadowing and computational identification of human microRNA genes
"Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
"Cell (2005) 120:21-24