miRBase entry: lla-mir-125b-1

Stem-loop lla-mir-125b-1


Accession
MI0002516
Description
Lagothrix lagotricha lla-mir-125b-1 precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

ugcgcuccucucagUCCCUGAGACCCUAACUUGUGAuguuuaccguuuaaauccacggguuaggcucuugggagcugcgagucgugcu
.((((..(((.((((.(((((((.(((((((((((..(((((.....))))).))))))))))).))))))).)))).)))..)))).

Structure
u    uc   u    C       C           Au     c 
 gcgc  cuc cagU CCUGAGA CCUAACUUGUG  guuua c
 ||||  ||| |||| ||||||| |||||||||||  ||||| g
 cgug  gag gucg ggguucu ggauugggcac  uaaau u
u    cu   c    a       c           -c     u 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature lla-miR-125b

Accession MIMAT0002227
Description Lagothrix lagotricha lla-miR-125b mature miRNA
Sequence 15 - UCCCUGAGACCCUAACUUGUGA - 36
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24