miRBase entry: ppa-mir-141

Stem-loop ppa-mir-141


Accession
MI0002490
Description
Pan paniscus ppa-mir-141 precursor miRNA
Gene family
MIPF0000019; mir-8


Sequence

uggccggcccuggguccaucuuccaguacaguguuggauggucuaauugugaagcuccuAACACUGUCUGGUAAAGAUGGcccccggguggguuc
.((((.((((.(((.(((((((((((.(((((((((((...((.......))...))).))))))))))))..))))))).))).)))).)))).

Structure
u    g    u   u       --    u        -   ugg  ua 
 ggcc gccc ggg ccaucuu  ccag acaguguu gga   uc  a
 |||| |||| ||| |||||||  |||| |||||||| |||   ||  u
 uugg uggg ccc GGUAGAA  GGUC UGUCACAA ccu   ag  u
c    g    c   c       AU    -        u   cga  ug 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr12: 7011606-7011700 [+]

Database links

Mature ppa-miR-141

Accession MIMAT0002201
Description Pan paniscus ppa-miR-141 mature miRNA
Sequence 60 - AACACUGUCUGGUAAAGAUGG - 80
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24