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miRBase |
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Stem-loop sequence ath-MIR447b |
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Accession | MI0002408 (change log) | |||||
Description | Arabidopsis thaliana miR447b stem-loop | |||||
Gene family | MIPF0000170; MIR447 | |||||
Literature search |
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3 open access papers mention ath-MIR447b | |||||
Stem-loop |
c uu a u u aca a - ug --u uucgagcuugguguguuuuucuagccagcc 5' cauucuuaauaua aauacuac uuuc uccau aa ccccuu augucgagu aacgaagcaucu gucccc gua uguc c ||||||||||||| |||||||| |||| ||||| || |||||| ||||||||| |||||||||||| |||||| ||| |||| c 3' guaagaguuauau uuaugaug aaag aggua uu ggggaa uauagcuca uuguuuuguaga cagggg uau acag a a uu a u c gaa g g uu uac ucuuauguuuguuacuaguugagcucuuga |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence ath-miR447b |
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Accession | MIMAT0002114 |
Sequence |
159 - uuggggacgagauguuuuguug - 180 |
Evidence | experimental; cloned [1-2], 5'RACE [2], 454 [3], Illumina [4] |
References |
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1 |
PMID:15851028
"microRNA-directed phasing during trans-acting siRNA biogenesis in plants"
Cell. 121:207-221(2005).
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2 |
PMID:16040653
"Expression of Arabidopsis MIRNA genes"
Plant Physiol. 138:2145-2154(2005).
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3 |
PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"
Genes Dev. 20:3407-3425(2006).
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4 |
PMID:19815687
"Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis"
J Exp Bot. 61:165-177(2010).
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