Stem-loop sequence ptc-MIR169e

AccessionMI0002255 (change log)
DescriptionPopulus trichocarpa miR169e stem-loop
Gene family MIPF0000012; MIR169_1
Literature search

9 open access papers mention ptc-MIR169e
(12 sentences)

Stem-loop 
   uauc u    c          ga       gcaagcuccucacacguauuuuguuucgaguuucauugauggcauugcuagau 
5'     g ggcg agccaaggau  cuugccg                                                     a
       | |||| ||||||||||  |||||||                                                      
3'     c cugu ucgguuccug  gaacggc                                                     g
   --au u    a          uc       uaguaaaguuggucuguuaccggguuuucaaacuuaaugcuuuaguauauaua
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000344.2: 5476416-5476581 [+]
intergenic
Database links

Mature sequence ptc-miR169e

Accession MIMAT0001961
Sequence

11 -  

cagccaaggaugacuugccgg

 - 31

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Evidence by similarity; MI0000212

References

1
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).