Accession
MI0002251
Description
Populus trichocarpa
ptc-MIR169af precursor miRNA
Gene family
MIPF0000012;
MIR169_1
Literature search
9 open access papers mention ptc-MIR169af
(12 sentences)
(12 sentences)
Sequence
cuuguuuggUAGCCAAGGACGACUUGCCCAccaccaucucaguuggguccaauauauuacugggcaccuuccauuugguuuugggcaagcaccuuggcuaguugaca
..((((.(.(((((((((..(.((((((((..((((.....(..(((((((.........))))).))..)....))))..))))))))).))))))))).).))))
..((((.(.(((((((((..(.((((((((..((((.....(..(((((((.........))))).))..)....))))..))))))))).))))))))).).))))
Structure
cu u g AC A cc ucuca uu - aua uguu g UAGCCAAGG G CUUGCCCA acca g gg gucca u |||| | ||||||||| | |||||||| |||| | || ||||| a acag u aucgguucc c gaacgggu uggu c cc cgggu u -- u g -a - uu -uuac uu a cau
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM000341.2: 6547979-6548085 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ptc-MIR169af
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptc-miR169af
| Accession | MIMAT0001957 |
| Description | Populus trichocarpa ptc-miR169af mature miRNA |
| Sequence | 10 - UAGCCAAGGACGACUUGCCCA - 30 |
| Evidence | not_experimental |
References
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