Stem-loop dre-mir-457b

Accession

MI0002178

Description

Danio rerio dre-mir-457b precursor miRNA

Gene family

MIPF0000006; mir-15

Literature search

2 open access papers mention dre-mir-457b
(3 sentences)

Sequence

983 reads, 144 reads per million, 13 experiments

gaauguacuaAAGCAGCACAUAAAUACUGGAGgugauugugguguuaUCCAGUAUUGCUGUUCUGCUGUaguaagacc
.....(((((.(((((.(((..(((((((((..((((......)))))))))))))..))).))))).))))).....

Structure

gaaug     A     C   UA         Gg    ug 
     uacua AGCAG ACA  AAUACUGGA  ugau  u
     ||||| ||||| |||  |||||||||  ||||   
     augaU UCGUC UGU  UUAUGACCU  auug  g
ccaga     G     U   CG         --    ug 

Annotation confidence High

Genome context

chr14: 31521930-31522007 [-]

Mature dre-miR-457b-5p

• Accession: MIMAT0001884
• Description: Danio rerio dre-miR-457b-5p mature miRNA
• Sequence: 11 - AAGCAGCACAUAAAUACUGGAG - 32
• Evidence: experimental ; cloned [1]

Mature dre-miR-457b-3p

• Accession: MIMAT0032004
• Description: Danio rerio dre-miR-457b-3p mature miRNA
• Sequence: 48 - UCCAGUAUUGCUGUUCUGCUGU - 69
• Evidence: not_experimental

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293