miRBase entry: dre-mir-146b

Stem-loop dre-mir-146b


Accession
MI0002013
Description
Danio rerio dre-mir-146b precursor miRNA
Gene family
MIPF0000103; mir-146

Literature search
5 open access papers mention dre-mir-146b
(133 sentences)

Sequence

19579 reads, 1370 reads per million, 11 experiments
gcucuuggcuuUGAGAACUGAAUUCCAAGGGUGucugcuuuauauucagcccacggaguucaguucuuaaguuuggaugc
(((((.(((((.((((((((((((((..((((................))))..))))))))))))))))))).))).))

Structure
  -   u     U              AA    Gucugcu 
gc ucu ggcuu GAGAACUGAAUUCC  GGGU       u
|| ||| ||||| ||||||||||||||  ||||        
cg agg uugaa uucuugacuugagg  cccg       u
  u   u     -              ca    acuuaua 


Annotation confidence High
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Genome context
chr21: 41639979-41640058 [+]

Database links

Mature dre-miR-146b

Accession MIMAT0001844
Description Danio rerio dre-miR-146b mature miRNA
Sequence 12 - UGAGAACUGAAUUCCAAGGGUG - 33
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293