miRBase entry: dre-mir-137-1

Stem-loop dre-mir-137-1


Accession
MI0002000
Description
Danio rerio dre-mir-137-1 precursor miRNA
Gene family
MIPF0000106; mir-137

Literature search
6 open access papers mention dre-mir-137-1
(110 sentences)

Sequence

3400 reads, 219 reads per million, 8 experiments
ggcucucuucggugACGGGUAUUCUUGGGUGGAUAAUAcggcucucguugUUAUUGCUUAAGAAUACGCGUAguugaggagaguc
((((((((((((..(((.(((((((((((((.((((((((.....)).))))))))))))))))))).)))..))))))))))))

Structure
            ug   G             G      -  g 
ggcucucuucgg  ACG GUAUUCUUGGGUG AUAAUA cg c
||||||||||||  ||| ||||||||||||| |||||| || u
cugagaggaguu  UGC CAUAAGAAUUCGU UAUUgu gc c
            gA   G             -      u  u 


Annotation confidence High
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Genome context
chr2: 20145741-20145825 [-]

Database links

Mature dre-miR-137-3p

Accession MIMAT0001834
Description Danio rerio dre-miR-137-3p mature miRNA
Sequence 51 - UUAUUGCUUAAGAAUACGCGUA - 72
Evidence experimental
cloned [1]
Database links
Predicted targets

Mature dre-miR-137-5p

Accession MIMAT0031972
Description Danio rerio dre-miR-137-5p mature miRNA
Sequence 15 - ACGGGUAUUCUUGGGUGGAUAAUA - 38
Evidence not_experimental

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293