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miRBase |
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Stem-loop sequence dre-mir-107a |
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Accession | MI0001963 (change log) | ||||
Previous IDs | dre-mir-107-1;dre-mir-107 | ||||
Description | Danio rerio miR-107 stem-loop | ||||
Gene family | MIPF0000024; mir-103 | ||||
Literature search |
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5 open access papers mention dre-mir-107a | ||||
Stem-loop |
----- u c -- u u u ugg a 5' uc gugugcu uga gcu cu uacaguguug cuug c u || ||||||| ||| ||| || |||||||||| |||| | g 3' ag cacacga acu cgg ga auguuacgac gaac g g cgaca u c au - c - -ua a |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence dre-miR-107a-5p |
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Accession | MIMAT0031959 |
Sequence |
14 - agcuucuuuacaguguugucuug - 36 |
Deep sequencing | 477 reads, 10 experiments |
Evidence | not experimental |
Database links |
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Mature sequence dre-miR-107a-3p |
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Accession | MIMAT0001817 |
Previous IDs | dre-miR-107a |
Sequence |
51 - agcagcauuguacagggcuauca - 73 |
Deep sequencing | 29647 reads, 11 experiments |
Evidence | by similarity; MI0000114 |
Database links |
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Predicted targets |
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References |
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1 |
PMID:15937218
"The developmental miRNA profiles of zebrafish as determined by small RNA cloning"
Genes Dev. 19:1288-1293(2005).
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