Stem-loop dre-mir-26a-3

Accession

MI0001926

Description

Danio rerio dre-mir-26a-3 precursor miRNA

Gene family

MIPF0000043; mir-26

Literature search

9 open access papers mention dre-mir-26a-3
(119 sentences)

Sequence

142578 reads, 8798 reads per million, 11 experiments

cuaagcugauacugagucaguguguggcugcaaccuggUUCAAGUAAUCCAGGAUAGGCUuuguggacuaggguuggccuguucuugguuacuugcacuggguugcagcuacuaaacaacuaagaagaucagaagag
.....(((((.((.......(((((((((((((((((((.(((((((((.((((((((((...............)))))))))).))))))))).))))))))))))))))...))).......))))))).....

Structure

cuaag     a  gagucag   ---                U         C          uugugg 
     cugau cu       ugu   guggcugcaaccuggU CAAGUAAUC AGGAUAGGCU      a
     ||||| ||       |||   |||||||||||||||| ||||||||| ||||||||||      c
     gacua ga       aca   caucgacguuggguca guucauugg ucuuguccgg      u
gagaa     -  agaauca   aau                c         u          uuggga 

Annotation confidence Not enough data

Genome context

chr24: 20470954-20471090 [-]

Mature dre-miR-26a-5p

• Accession: MIMAT0001794
• Description: Danio rerio dre-miR-26a-5p mature miRNA
• Sequence: 39 - UUCAAGUAAUCCAGGAUAGGCU - 60
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293