miRBase entry: dre-mir-26a-1

Stem-loop dre-mir-26a-1


Accession
MI0001923
Description
Danio rerio dre-mir-26a-1 precursor miRNA
Gene family
MIPF0000043; mir-26

Literature search
9 open access papers mention dre-mir-26a-1
(119 sentences)

Sequence

142929 reads, 8809 reads per million, 11 experiments
uuuggccuggUUCAAGUAAUCCAGGAUAGGCUugugauguccggaaagCCUAUUCGGGAUGACUUGGUUCaggaauga
.....(((((.((((((.((((.((((((((((............)))))))))).)))).)))))).))))).....

Structure
uuugg     U      A    A          gugau 
     ccugg UCAAGU AUCC GGAUAGGCUu     g
     ||||| |||||| |||| ||||||||||      
     ggaCU GGUUCA UAGG CUUAUCCgaa     u
aguaa     U      G    G          aggcc 


Annotation confidence High
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Genome context
chr9: 41733533-41733610 [+]

Database links

Mature dre-miR-26a-5p

Accession MIMAT0001794
Description Danio rerio dre-miR-26a-5p mature miRNA
Sequence 11 - UUCAAGUAAUCCAGGAUAGGCU - 32
Evidence experimental
cloned [1]
Database links
Predicted targets

Mature dre-miR-26a-3p

Accession MIMAT0031947
Description Danio rerio dre-miR-26a-3p mature miRNA
Sequence 49 - CCUAUUCGGGAUGACUUGGUUC - 70
Evidence not_experimental
Database links

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293