miRBase entry: dre-let-7i

Stem-loop dre-let-7i


Accession
MI0001876
Description
Danio rerio dre-let-7i precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
39 open access papers mention dre-let-7i
(214 sentences)

Sequence

2967 reads, 227 reads per million, 11 experiments
guguacuggcUGAGGUAGUAGUUUGUGCUGUUgguugggaugugacauugcccguuauggagaugacugcgcaagcuacucccuugccagugcug
..((((((((.((((.((((((((((((.((..(((....((((((.......))))))..))).)).)))))))))))).))))))))))))..

Structure
gu        U    U            U  Ug   ggga      au 
  guacuggc GAGG AGUAGUUUGUGC GU  guu    ugugac  u
  |||||||| |||| |||||||||||| ||  |||    ||||||  g
  cgugaccg uucc ucaucgaacgcg ca  uag    guauug  c
gu        -    c            u  -g   --ag      cc 


Annotation confidence Not enough data
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Genome context
chr25: 1629655-1629749 [-]

Database links

Mature dre-let-7i

Accession MIMAT0001767
Description Danio rerio dre-let-7i mature miRNA
Sequence 11 - UGAGGUAGUAGUUUGUGCUGUU - 32
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293