Stem-loop sbi-MIR156e

Accession

MI0001856

Description

Sorghum bicolor sbi-MIR156e precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

8 open access papers mention sbi-MIR156e
(22 sentences)

Sequence

cgauuaggcccugaagagauUGACAGAAGAGAGCGAGCACccggcgcggcggccggcauggagcgcaugccguccccgccgcgugcucgcuucucuuucugucagccucucucucguccuggg
...(((((.(..((((((.(((((((((((((((((((((.(((((.((.(((.((((((.....)))))))))))))))).)))))))).)))).))))))))).)))).))..).))))).

Structure

cga     c cu  -    a         -    -        c     c  c   c      g 
   uuagg c  ga agag uUGACAGAA GAGA GCGAGCAC cggcg gg ggc ggcaug a
   ||||| |  || |||| ||||||||| |||| |||||||| ||||| || ||| |||||| g
   ggucc g  cu ucuc gacugucuu cucu cgcucgug gccgc cc cug ccguac c
--g     u cu  c    c         u    u        c     -  -   -      g 

Annotation confidence Not enough data

Genome context

chr10: 55313871-55313993 [+]

Mature sbi-miR156e

• Accession: MIMAT0001758
• Description: Sorghum bicolor sbi-miR156e mature miRNA
• Sequence: 21 - UGACAGAAGAGAGCGAGCAC - 40
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13