Stem-loop sequence sbi-MIR156e

Accession

MI0001856 (change log)

Description

Sorghum bicolor miR156e stem-loop

Gene family

MIPF0000008; MIR156

Literature search

8 open access papers mention sbi-MIR156e
(22 sentences)

Stem-loop

   cga     c cu  -    au        -    -        c     c  c   c      g 
5'    uuagg c  ga agag  ugacagaa gaga gcgagcac cggcg gg ggc ggcaug a
      ||||| |  || ||||  |||||||| |||| |||||||| ||||| || ||| |||||| g
3'    ggucc g  cu ucuc  acugucuu cucu cgcucgug gccgc cc cug ccguac c
   --g     u cu  c    cg        u    u        c     -  -   -      g 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Sorghum_bicolor_NCBIv3; GCA_000003195.3): chr10: 55313871-55313993 [+]
• Overlapping transcripts:

  intergenic

Database links

• RNAcentral:URS00007B408C_4558
• miRBase Tracker:MI0001856

Mature sequence sbi-miR156e

• Accession: MIMAT0001758
• Sequence: 21 - ugacagaagagagcgagcac - 40
• Evidence: by similarity; MI0001504

References

1. "Conservation and divergence of microRNA families in plants" Dezulian T, Palatnik JF, Huson DH, Weigel D http://genomebiology.com/2005/6/11/p13 (2005).