Stem-loop sequence sbi-MIR164c

Accession

MI0001852 (change log)

Description

Sorghum bicolor miR164c stem-loop

Gene family

MIPF0000045; MIR164

Literature search

5 open access papers mention sbi-MIR164c
(13 sentences)

Stem-loop

   uau       uu    ag        agca                      ----uu    u   -    ucuc   u 
5'    ggugugu  gugc  gguggaga    ggacacgugagcgaccauccag      ucca cgc uggc    cgc g
      |||||||  ||||  ||||||||    ||||||||||||||||||||||      |||| ||| ||||    ||| c
3'    cuacaug  cacg  ccaccucu    ccuguguacucgcugguggguu      aggu gcg gccg    gcg g
   -gc       gc    ag        ccug                      gcugcu    u   u    --uc   g 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Sorghum_bicolor_NCBIv3; GCA_000003195.3): chr1: 68718394-68718546 [-]
• Overlapping transcripts:

  intergenic

Database links

• RNAcentral:URS00007AA050_4558
• miRBase Tracker:MI0001852

Mature sequence sbi-miR164c

• Accession: MIMAT0001754
• Sequence: 21 - uggagaagcaggacacgugag - 41
• Evidence: by similarity; MI0001105

References

1. "Conservation and divergence of microRNA families in plants" Dezulian T, Palatnik JF, Huson DH, Weigel D http://genomebiology.com/2005/6/11/p13 (2005).