miRBase entry: zma-MIR169g

Stem-loop zma-MIR169g


Accession
MI0001828
Description
Zea mays zma-MIR169g precursor miRNA
Gene family
MIPF0000012; MIR169_1

Literature search
30 open access papers mention zma-MIR169g
(218 sentences)

Sequence

308 reads, 1754 reads per million, 10 experiments
cagagcuagccugccucuggUAGCCAAGGAUGACUUGCCUAcauggucucgcuaguuccgguuguugcaugcaugccacuaugccaguccugcuggguuugugggcggucuccuuggcuagccugaguggcucuugccug
(((.((.((((...(((.((((((((((((.((((.(((((((....((((.(((..(.(((.((.(((....))).))...))).)..))).))))..)))))))))))))))))))).))).))).))))...)))))

Structure
   a  --u    ugc   u   -         U    U       uggu    c   uu c   --u  u   u 
cag gc   agcc   cuc ggU AGCCAAGGA GACU GCCUAca    cucg uag  c ggu   gu gca g
||| ||   ||||   ||| ||| ||||||||| |||| |||||||    |||| |||  | |||   || |||  
guc cg   ucgg   gag ccg ucgguuccu cugg cgggugu    gggu guc  g ccg   ca cgu c
   -  uuc    --u   u   a         -    -       --uu    c   cu a   uau  c   a 


Annotation confidence Not enough data
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Genome context
chr2: 67281149-67281288 [+]

Database links

Mature zma-miR169g

Accession MIMAT0001730
Description Zea mays zma-miR169g mature miRNA
Sequence 21 - UAGCCAAGGAUGACUUGCCUA - 41
Evidence not_experimental

References

  1. Conservation and divergence of microRNA families in plants
    "Dezulian T, Palatnik JF, Huson DH, Weigel D"
    Genome Biol. (2005) 6:P13