Stem-loop sequence mtr-MIR169b

Accession

MI0001742 (change log)

Description

Medicago truncatula miR169b stem-loop

Stem-loop

   a     ca      g    gc         ug   u    a  -acguu   -   ugu  a 
5'  agagg  gagaga uaau  agccaagga  acu gccg ca      ggc gaa   uc u
    |||||  |||||| ||||  |||||||||  ||| |||| ||      ||| |||   ||  
3'  ucuuc  cucucu auug  ucgguuccu  uga cggc gu      ccg cuu   ag g
   -     ua      g    ua         gu   c    c  guuacu   u   --u  u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr4: 44375579-44375655 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from mtr-MIR169b

• mtr-MIR169b: chr4: 44375579-44375655 [-]
• mtr-MIR169k: chr4: 44368729-44368828 [+]
• mtr-MIR169i: chr4: 44366823-44366908 [-]

Database links

• miRBase Tracker:MI0001742