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miRBase |
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Stem-loop sequence mghv-mir-M1-2 |
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Accession | MI0001670 (change log) | |||||||||||||||||||||||||||||||
Previous IDs | mhv-miR-M1-2 | |||||||||||||||||||||||||||||||
Description | Mouse gammaherpesvirus 68 miR-M1-2 stem-loop | |||||||||||||||||||||||||||||||
Stem-loop |
- u u u a ga a 5' gagagggggag g g ggucugu ga gac u ||||||||||| | | ||||||| || ||| 3' uucucccccuc c c ccagacg cu uug g u u - c g ag a |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence mghv-miR-M1-2-5p |
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Accession | MIMAT0017186 |
Previous IDs | mghv-mir-M1-2-5p |
Sequence |
2 - agagggggaguguguggucugu - 23 |
Evidence | experimental; 454 [4] |
Mature sequence mghv-miR-M1-2-3p |
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Accession | MIMAT0001565 |
Previous IDs | mhv-miR-M1-2;mghv-miR-M1-2 |
Sequence |
45 - cagacccccucucccccucuuu - 66 |
Evidence | experimental; cloned [1-3], 454 [4], Illumina [5] |
References |
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1 |
PMID:15782219
"Identification of microRNAs of the herpesvirus family"
Nat Methods. 2:269-276(2005).
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2 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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3 |
PMID:19948768
"Mature and functional viral miRNAs transcribed from novel RNA polymerase III promoters"
RNA. 16:170-185(2010).
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4 |
PMID:20668074
"Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68"
J Virol. 84:10266-10275(2010).
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5 |
PMID:20660200
"Identification of novel microRNA-like molecules generated from herpesvirus and host tRNA transcripts"
J Virol. 84:10344-10353(2010).
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