miRBase entry: cfa-mir-365-2

Stem-loop cfa-mir-365-2


Accession
MI0001647
Description
Canis familiaris cfa-mir-365-2 precursor miRNA
Gene family
MIPF0000061; mir-365


Sequence

agaguguucaaggacagcaagaaaaaugagggacuuucaggggcagcuguguuuucugacucagucaUAAUGCCCCUAAAAAUCCUUAUuguucuugcagugugcaucggg
...........(.((((((((((.((((((((..(((.(((((((((((.(((....))).)))).....))))))).))).)))))))).)))))))..))).)......

Structure
agaguguucaa g   --       a        ac   c       -----    u   u 
           g aca  gcaagaa aaugaggg  uuu aggggca     gcug guu u
           | |||  ||||||| ||||||||  ||| |||||||     |||| |||  
           c ugu  cguucuu uUAUUCCU  AAA UCCCCGU     ugac cag c
-----gggcua g   ga       g        -A   A       AAUac    u   u 


Annotation confidence Not enough data
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Comments
Xie et al. [1] refer to this sequence by the internal identifier MIR190. The sequence is unrelated to mammalian mir-190 (MIR:MI0000486).

Genome context
chr9: 41303092-41303202 [-]

Database links

Mature cfa-miR-365

Accession MIMAT0001540
Description Canis familiaris cfa-miR-365 mature miRNA
Sequence 68 - UAAUGCCCCUAAAAAUCCUUAU - 89
Evidence experimental
cloned [1]

References

  1. PubMed ID: 15735639
    Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals
    "Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M"
    "Nature (2005) 434:338-345