Stem-loop sequence aga-mir-9b

Accession

MI0001634 (change log)

Description

Anopheles gambiae miR-9b stem-loop

Gene family

MIPF0000014; mir-9

Literature search

3 open access papers mention aga-mir-9b
(8 sentences)

Stem-loop

      -   u       ac         uuu          u aaugc 
5' ugc cac uauuggg  uuuggugau   agcuguaugu g     a
   ||| ||| |||||||  |||||||||   |||||||||| |     u
3' aug gug guaaucc  aaaccacua   ucgauauaca c     u
      u   u       aa         -uu          c aaucc 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (AgamP3; GCA_000005575.1): chr3R: 5887786-5887878 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from aga-mir-9b

• aga-mir-9c: chr3R: 5891167-5891256 [-]
• aga-mir-306: chr3R: 5888600-5888675 [-]
• aga-mir-79: chr3R: 5888298-5888391 [-]
• aga-mir-9b: chr3R: 5887786-5887878 [-]

Database links

• miRBase Tracker:MI0001634

Mature sequence aga-miR-9b

• Accession: MIMAT0001529
• Sequence: 15 - acuuuggugauuuuagcuguaug - 37
• Evidence: by similarity; MI0000415