Stem-loop sequence aga-mir-276

Accession

MI0001614 (change log)

Description

Anopheles gambiae miR-276 stem-loop

Gene family

MIPF0000124; mir-276

Literature search

2 open access papers mention aga-mir-276
(5 sentences)

Stem-loop

   -------   gacug   uc    a     ag           -uaa  g 
5'        ggu     cca  agcg gguau  aguuccuacgg    uc a
          |||     |||  |||| |||||  |||||||||||    ||  
3'        ccg     ggu  ucgu ccaua  ucaaggauguu    ag u
   ccauuug   --aua   uc    g     cu           ucaa  u 

Confidence

Annotation confidence: not enough data

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Comments

miR-276-5p and miR-276-3p were cloned in Anopheles stephensi and mappedt to the A. gambiae genome [1].

Genome context

• Coordinates (AgamP3; GCA_000005575.1): chr2L: 18991754-18991845 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0001614

Mature sequence aga-miR-276-5p

• Accession: MIMAT0001509
• Previous IDs: aga-miR-276
• Sequence: 14 - agcgagguauagaguuccua - 33
• Evidence: by similarity; MI0000359

Mature sequence aga-miR-276-3p

• Accession: MIMAT0006782
• Sequence: 55 - uaggaacuucauaccgugcucu - 76
• Evidence: by similarity; MI0000359

References

1. PMID:18500992 "Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi" Mead EA, Tu Z BMC Genomics. 9:244(2008).