Stem-loop sequence aga-mir-125

Accession

MI0001605 (change log)

Description

Anopheles gambiae miR-125 stem-loop

Gene family

MIPF0000033; mir-10

Literature search

1 open access papers mention aga-mir-125
(1 sentences)

Stem-loop

          u      uuuguau        uc  u    c cu         cuau guu 
5' uauuguu cguuuu       cugcugau  cc gaga c  aacuuguga    c   g
   ||||||| ||||||       ||||||||  || |||| |  |||||||||    |    
3' auggcaa guagag       ggcgauua  gg cucu g  uugaacacu    g   c
          c      -----uu        -u  c    a uu         --uu aaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AgamP3; GCA_000005575.1): chr3R: 10270160-10270271 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from aga-mir-125

• aga-mir-100: chr3R: 10274677-10274768 [-]
• aga-let-7: chr3R: 10270708-10270797 [-]
• aga-mir-125: chr3R: 10270160-10270271 [-]

Database links

• miRBase Tracker:MI0001605

Mature sequence aga-miR-125

• Accession: MIMAT0001500
• Sequence: 30 - ucccugagacccuaacuuguga - 51
• Evidence: by similarity; MI0000417