Stem-loop sequence ame-mir-278

AccessionMI0001586 (change log)
DescriptionApis mellifera miR-278 stem-loop
Gene family MIPF0000155; mir-278
Stem-loop 
   -uca     ag    uc        -    u        --    uu 
5'     cgagu  ugug  cggaugag gucu caucgacc  guga  u
       |||||  ||||  |||||||| |||| ||||||||  ||||  a
3'     gcuca  acgu  gccugcuu cagg guggcugg  uacu  a
   agga     ga    uu        u    -        aa    uu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (AMEL4.5; GCA_000002195.1) Overlapping transcripts
CM000061.5: 13346917-13347008 [+]
intergenic
Database links

Mature sequence ame-miR-278-3p

Accession MIMAT0001482
Sequence

57 -  

ucggugggacuuucguccguuu

 - 78

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Evidence experimental; RTPCR [1], Illumina [2-3]

References

1
PMID:17543122 "Computational and transcriptional evidence for microRNAs in the honey bee genome" Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG Genome Biol. 8:R97(2007).
2
PMID:22409512 "Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome" Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y Genes Brain Behav. 11:660-670(2012).
3
PMID:26853694 "MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)" Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL Insect Mol Biol. 25:216-226(2016).