miRBase entry: ame-mir-1-1

Stem-loop ame-mir-1-1


Accession
MI0001575
Description
Apis mellifera ame-mir-1-1 precursor miRNA
Gene family
MIPF0000038; mir-1

Literature search
5 open access papers mention ame-mir-1-1
(15 sentences)

Sequence

ccgggcgaugcuguuccgugcuuccuuacuucccauaguggaugcgacguaUGGAAUGUAAAGAAGUAUGGAGcugcgcccgg
(((((((.....((((((((((((.((((...(((((((.(...).)).)))))...)))).))))))))))))..)))))))

Structure
       augcu            c    uuc     -  g a 
ccgggcg     guuccgugcuuc uuac   ccaua gu g  
|||||||     |||||||||||| ||||   ||||| || | u
ggcccgc     cGAGGUAUGAAG AAUG   GGUau ca c  
       ---gu            A    UAA     g  g g 


Annotation confidence Not enough data
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Genome context
CM000069.5: 4198820-4198902 [-]

Database links

Mature ame-miR-1-3p

Accession MIMAT0001471
Description Apis mellifera ame-miR-1-3p mature miRNA
Sequence 52 - UGGAAUGUAAAGAAGUAUGGAG - 73
Evidence experimental
array [1], RTPCR [1], Illumina [2]

References

  1. PubMed ID: 17543122
    Computational and transcriptional evidence for microRNAs in the honey bee genome
    Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
    Genome Biol (2007) 8:R97

  2. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670