Stem-loop sbi-MIR172e

Accession

MI0001568

Description

Sorghum bicolor sbi-MIR172e precursor miRNA

Gene family

MIPF0000035; MIR172

Literature search

4 open access papers mention sbi-MIR172e
(30 sentences)

Sequence

ucggagccgacucucugcaggugcagcagcaucaagguucgccagcagcaagcgaucgaucgaggcgugugugugUGAAUCUUGAUGAUGCUGCACcagcaaugagccggccggc
.(.(.((((.(((..(((.(((((((((.(((((((((((((..(((.((.((..((....)).)).)))))..))))))))))))).))))))))).)))..))).))))).).

Structure

u g a    a   uc   a         g             ca   g  a  ga  g 
 c g gccg cuc  ugc ggugcagca caucaagguucgc  gca ca gc  uc a
 | | |||| |||  ||| ||||||||| |||||||||||||  ||| || ||  ||  
 g c cggc gag  acg cCACGUCGU GUAGUUCUAAGUg  ugu gu cg  ag u
c g -    c   ua   a         A             ug   -  g  -g  c 

Annotation confidence Not enough data

Genome context

chr2: 14122957-14123071 [-]

Mature sbi-miR172e

• Accession: MIMAT0001464
• Description: Sorghum bicolor sbi-miR172e mature miRNA
• Sequence: 76 - UGAAUCUUGAUGAUGCUGCAC - 96
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13