Stem-loop sbi-MIR169i

Accession

MI0001563

Description

Sorghum bicolor sbi-MIR169i precursor miRNA

Gene family

MIPF0000012; MIR169_1

Literature search

4 open access papers mention sbi-MIR169i
(23 sentences)

Sequence

gauggagagcccccuuuugcUAGCCAAGAAUGACUUGCCUAugcaugcccucuguuggcaauuccuccagccauggagauugcacaaggugaauuuuugcggcauagaugauggaugcaauguggcugcaugggcaggucuucuuggcuagccagagugcucucaucca
((((.(((((...((((.((((((((((((.((((((((((((((.(((.(((.((((((((..(((((....)))))))))).))).).))....(((((.(((.....)))..)))))...))))))))))))))))))))))))))))).)))).)))))))))..

Structure

--    g     ccc    u            U              u   ------------------------------c  - g   -     uc     g 
  gaug agagc   cuuu gcUAGCCAAGAA GACUUGCCUAugca gcc                               uc u uug gcaau  cucca c
  |||| |||||   |||| |||||||||||| |||||||||||||| |||                               || | ||| |||||  |||||  
  cuac ucucg   gaga cgaucgguucuu cuggacggguacgu cgg                               ag g aac cguua  gaggu c
ac    -     --u    c            -              -   uguaacguagguaguagauacggcguuuuua  u g   a     --     a 

Annotation confidence Not enough data

Genome context

chr5: 16922857-16923025 [+]

Mature sbi-miR169i

• Accession: MIMAT0001459
• Description: Sorghum bicolor sbi-miR169i mature miRNA
• Sequence: 21 - UAGCCAAGAAUGACUUGCCUA - 41
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13