Stem-loop sequence sbi-MIR395c

Accession

MI0001535 (change log)

Description

Sorghum bicolor miR395c stem-loop

Stem-loop

   -  a   uuuu   a     u            -            au c      cc     c  -ga    gg       ugugcuacaugagccaagugugugc 
5'  gc cua    gag gcuuu gugaaguguuug ggggaacucuug  g cacuaa  auuug ua   gguu  ccaagug                         u
    || |||    ||| ||||| |||||||||||| ||||||||||||  | ||||||  ||||| ||   ||||  |||||||                          
3'  cg gau    uuc cgaaa cacuucacaaac ucucuugaggac  c gugguu  ugaac au   uuaa  gguuuac                         a
   u  a   -uuu   a     -            g            cc u      --     u  aua    -a       acuaaacagaaguuuaguaaaguac 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Sorghum_bicolor_NCBIv3; GCA_000003195.3): chr6: 57228201-57228273 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from sbi-MIR395c

• sbi-MIR395e: chr6: 57228710-57228814 [-]
• sbi-MIR395d: chr6: 57228519-57228621 [-]
• sbi-MIR395c: chr6: 57228201-57228273 [-]
• sbi-MIR395f: chr6: 57228009-57228130 [-]

Database links

• miRBase Tracker:MI0001535