miRBase entry: sbi-MIR394a

Stem-loop sbi-MIR394a


Accession
MI0001531
Description
Sorghum bicolor sbi-MIR394a precursor miRNA
Gene family
MIPF0000100; MIR394

Literature search
1 open access papers mention sbi-MIR394a
(2 sentences)

Sequence

cuuuacauacugagaguuccUUGGCAUUCUGUCCACCUCCuugcccaucgucagauauauguguugcuuuuggagguggacauacugccaauggagcuguguaggccucu
.........((((.((((((((((((...(((((((((((.....((.((.((......)))).)).....)))))))))))...)))))).)))))).).)))......

Structure
cuuuacaua   - g      -      UUC           uugcc  u  u  ga 
         cug a aguucc UUGGCA   UGUCCACCUCC     ca cg ca  u
         ||| | |||||| ||||||   |||||||||||     || || ||   
         gau u ucgagg aaccgu   acagguggagg     gu gu gu  a
---ucuccg   g g      u      cau           uuuuc  u  -  au 


Annotation confidence Not enough data
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Genome context
chr2: 66830969-66831078 [+]

Database links

Mature sbi-miR394a

Accession MIMAT0001427
Description Sorghum bicolor sbi-miR394a mature miRNA
Sequence 21 - UUGGCAUUCUGUCCACCUCC - 40
Evidence not_experimental

References

  1. Conservation and divergence of microRNA families in plants
    "Dezulian T, Palatnik JF, Huson DH, Weigel D"
    Genome Biol. (2005) 6:P13