miRBase entry: dre-mir-223

Stem-loop dre-mir-223


Accession
MI0001389
Description
Danio rerio dre-mir-223 precursor miRNA
Gene family
MIPF0000067; mir-223

Literature search
8 open access papers mention dre-mir-223
(51 sentences)

Sequence

2456 reads, 216 reads per million, 11 experiments
cucuccuccugaucuagacucuucucuuagaguauuugacagacugugguugacacucgaucuaaaggggUGUCAGUUUGUCAAAUACCCCaagagagg
....................((((((((.(.((((((((((((((......(((((((.........))))))))))))))))))))).).))))))))

Structure
cucuccuccugaucuagacu        a a              gugguu       gau 
                    cuucucuu g guauuugacagacu      gacacuc   c
                    |||||||| | ||||||||||||||      |||||||   u
                    ggagagaa C CAUAAACUGUUUGA      CUGUggg   a
--------------------        C C              ------       gaa 


Annotation confidence High
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Genome context
chr5: 22234407-22234505 [-]

Database links

Mature dre-miR-223

Accession MIMAT0001290
Description Danio rerio dre-miR-223 mature miRNA
Sequence 71 - UGUCAGUUUGUCAAAUACCCC - 91
Evidence experimental
PCR [1]
Database links
Predicted targets

References

  1. PubMed ID: 12624257
    Vertebrate microRNA genes
    "Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP"
    "Science (2003) 299:1540