miRBase entry: dre-mir-7a-2

Stem-loop dre-mir-7a-2


Accession
MI0001362
Description
Danio rerio dre-mir-7a-2 precursor miRNA
Gene family
MIPF0000022; mir-7

Literature search
13 open access papers mention dre-mir-7a-2
(103 sentences)

Sequence

1515 reads, 117 reads per million, 8 experiments
uuuugggcauuaUGGAAGACUAGUGAUUUUGUUGUugugacgucaucaguacugacaacaagucacagucugccucagugaccagaauccacucguc
((((((.((((..((.(((((.(((((((.((((((...((.......))...)))))))))))))))))).))..)))).))))))..........

Structure
----------      g    aU  A     A       U      gug  gu 
          uuuugg cauu  GG AGACU GUGAUUU GUUGUu   ac  c
          |||||| ||||  || ||||| ||||||| ||||||   ||  a
          aagacc guga  cc ucuga cacugaa caacag   ug  u
cugcucaccu      a    cu  g     -       -      uca  ac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr7: 14450524-14450620 [-]

Database links

Mature dre-miR-7a

Accession MIMAT0001266
Description Danio rerio dre-miR-7a mature miRNA
Sequence 13 - UGGAAGACUAGUGAUUUUGUUGU - 35
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 12624257
    Vertebrate microRNA genes
    "Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP"
    "Science (2003) 299:1540