Stem-loop sequence dps-mir-317

Accession

MI0001358 (change log)

Description

Drosophila pseudoobscura miR-317 stem-loop

Gene family

MIPF0000144; mir-317

Stem-loop

   u   --  u         aua    --     c      ugaauau 
5'  gca  ac gccguuggg   cacc  cugug ucgcuu       g
    |||  || |||||||||   ||||  ||||| ||||||        
3'  cgu  ug cgguaaccu   gugg  gacac agugaa       g
   a   cu  c         aug    uc     a      cgaacgu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (dpse_r2.26_FB2012_01): 2: 5030001-5030090 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from dps-mir-317

• dps-mir-317: 2: 5030001-5030090 [-]
• dps-mir-277: 2: 5020595-5020694 [-]

Database links

• miRBase Tracker:MI0001358

Mature sequence dps-miR-317

• Accession: MIMAT0001263
• Sequence: 55 - ugaacacagcuggugguauccaau - 78
• Evidence: by similarity; MI0000429, MI0000429