Stem-loop sequence dps-mir-125

Accession

MI0001324 (change log)

Description

Drosophila pseudoobscura miR-125 stem-loop

Gene family

MIPF0000033; mir-10

Stem-loop

        gu    au      augg ug  uc  u    c cu         cu  ua 
5' gacau  gcaa  guuugu    c  au  cc gaga c  aacuuguga  uu  a
   |||||  ||||  ||||||    |  ||  || |||| |  |||||||||  ||  u
3' uugua  cguu  caaacg    g  ua  gg cucu g  uugaacacu  ga  a
        gu    --      --ca gu  -u  c    a uu         uu  cc 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (dpse_r2.26_FB2012_01): 4_group3: 3636011-3636120 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from dps-mir-125

• dps-mir-100: 4_group3: 3634753-3634852 [+]
• dps-let-7: 4_group3: 3635655-3635731 [+]
• dps-mir-125: 4_group3: 3636011-3636120 [+]

Database links

• miRBase Tracker:MI0001324

Mature sequence dps-miR-125

• Accession: MIMAT0001230
• Sequence: 29 - ucccugagacccuaacuuguga - 50
• Evidence: by similarity; MI0000417, MI0000417