Stem-loop sequence dps-mir-9c

Accession

MI0001306 (change log)

Description

Drosophila pseudoobscura miR-9c stem-loop

Gene family

MIPF0000014; mir-9

Stem-loop

       uu    uuu         ucu    g     u  uuuu   a 
5' auuu  gcug   cuuugguau   agcu uagau gu    ugc c
   ||||  ||||   |||||||||   |||| ||||| ||    ||| a
3' uaaa  cgac   gaaaccaua   ucga aucua ua    aug u
       uu    cuc         uuu    a     c  ---u   u 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (dpse_r2.26_FB2012_01): 4_group3: 8443195-8443286 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from dps-mir-9c

• dps-mir-9c: 4_group3: 8443195-8443286 [+]
• dps-mir-306: 4_group3: 8443820-8443899 [+]
• dps-mir-79: 4_group3: 8443999-8444082 [+]
• dps-mir-9b: 4_group3: 8444194-8444284 [+]

Database links

• miRBase Tracker:MI0001306

Mature sequence dps-miR-9c

• Accession: MIMAT0001213
• Sequence: 13 - ucuuugguauucuagcuguaga - 34
• Evidence: by similarity; MI0000413, MI0000413