Stem-loop gga-mir-9-2

Accession

MI0001283

Description

Gallus gallus gga-mir-9-2 precursor miRNA

Gene family

MIPF0000014; mir-9

Literature search

19 open access papers mention gga-mir-9-2
(362 sentences)

Sequence

5208433 reads, 54839 reads per million, 5 experiments

ggaagcgaguuguuaUCUUUGGUUAUCUAGCUGUAUGAguguuuuggucuucauaaagcuagauaaccgaaaguaaaaacuccuuca
.((((.(((((.((((.(((((((((((((((.((((((.(.......))))))).))))))))))))))).)))).))))))))).

Structure

g    c     g    C               G      u uu 
 gaag gaguu uuaU UUUGGUUAUCUAGCU UAUGAg g  u
 |||| ||||| |||| ||||||||||||||| |||||| |  u
 cuuc cucaa aaug aagccaauagaucga auacuu c  g
a    -     a    a               a      - ug 

Annotation confidence High

Comments

This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context

chrZ: 60469242-60469328 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-9-2

Mature gga-miR-9-5p

• Accession: MIMAT0001195
• Description: Gallus gallus gga-miR-9-5p mature miRNA
• Sequence: 16 - UCUUUGGUUAUCUAGCUGUAUGA - 38
• Evidence: not_experimental

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716