miRBase entry: gga-mir-7b

Stem-loop gga-mir-7b


Accession
MI0001279
Description
Gallus gallus gga-mir-7b precursor miRNA
Gene family
MIPF0000022; mir-7

Literature search
12 open access papers mention gga-mir-7b
(182 sentences)

Sequence

51 reads, 3 reads per million, 4 experiments
uggacauuggucuaguucugugUGGAAGACUAGUGAUUUUUGUUguuuuuagauaacuaaauugacaacaaaucacagucuaccauauggcacagacuaugccucuacag
.((.(((.(((((.((.((((((((.(((((.((((((..((((((((((((....)))))..)))))))))))))))))).)))))))).)))))))))))).......

Structure
------u  a   u     a  u        A     A      UU       --     a 
       gg cau ggucu gu cugugUGG AGACU GUGAUU  UGUUguu  uuuag u
       || ||| ||||| || |||||||| ||||| ||||||  |||||||  |||||  
       cc gua ucaga ca gguauacc ucuga cacuaa  acaacag  aaauc a
gacaucu  -   -     -  c        a     -      --       uu     a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrW: 3067226-3067335 [-]

Database links

Mature gga-miR-7b

Accession MIMAT0001192
Description Gallus gallus gga-miR-7b mature miRNA
Sequence 23 - UGGAAGACUAGUGAUUUUUGUU - 44
Evidence experimental
cloned [2]

References

  1. PubMed ID: 15592404
    Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    "International Chicken Genome Sequencing Consortium"
    "Nature (2004) 432:695-716


  2. "McBride D, Carre W, Law A, Clinton M"
    (None) None: