Accession
MI0001262
Description
Gallus gallus
gga-let-7j precursor miRNA
Gene family
MIPF0000002;
let-7
Literature search
45 open access papers mention gga-let-7j
(232 sentences)
(232 sentences)
Sequence
6203762
reads,
73377
reads per million, 5 experiments
gUGAGGUAGUAGGUUGUAUAGUUuggugggagggauucugucccauuucaggugauaaCUAUACAGUCUAUUGCCUUCCUuaa
..(((((((((((((((((((((...((((((((((...))))).)))))......)))))))))))))))))))))......
..(((((((((((((((((((((...((((((((((...))))).)))))......)))))))))))))))))))))......
Structure
----gU ---ugg - u
GAGGUAGUAGGUUGUAUAGUU uggga gggau
||||||||||||||||||||| ||||| ||||| c
UUCCGUUAUCUGACAUAUCaa acuuu cccug
aauUCC uagugg a u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.
Genome context
chr26: 1639928-1640010 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gga-let-7j
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gga-let-7j-5p
| Accession | MIMAT0001181 |
| Description | Gallus gallus gga-let-7j-5p mature miRNA |
| Sequence | 2 - UGAGGUAGUAGGUUGUAUAGUU - 23 |
| Evidence |
experimental
Illumina [2] |
| Database links |
|
| Predicted targets |
|
Mature gga-let-7j-3p
| Accession | MIMAT0026542 |
| Description | Gallus gallus gga-let-7j-3p mature miRNA |
| Sequence | 59 - CUAUACAGUCUAUUGCCUUCCU - 80 |
| Evidence |
experimental
Illumina [2] |
References
|
