Stem-loop sequence gga-mir-137

AccessionMI0001221 (change log)
DescriptionGallus gallus miR-137 stem-loop
Gene family MIPF0000106; mir-137
Literature search

5 open access papers mention gga-mir-137
(18 sentences)

Stem-loop 
   ---u   --           ug   g           ug a     -  g 
5'     cug  acucucuucgg  acg guauucuuggg  g uaaua cg a
       |||  |||||||||||  ||| |||||||||||  | ||||| || u
3'     ggc  ugagaggagcu  ugc cauaagaauuc  u auugu gc u
   cggc   ca           ga   g           gu -     u  a
Get sequence
Deep sequencing
91569 reads, 860 reads per million, 5 experiments
Confidence Annotation confidence: high
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Comments

This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context
Coordinates (Gallus_gallus-5.0; GCA_000002315.3) Overlapping transcripts
chr8: 12517007-12517102 [+]
intergenic
Database links

Mature sequence gga-miR-137-5p

Accession MIMAT0026523
Sequence

18 -  

acggguauucuuggguggauaaua

 - 41

Get sequence
Deep sequencing100 reads, 2 experiments
Evidence experimental; Illumina [2]
Predicted targets

Mature sequence gga-miR-137-3p

Accession MIMAT0001153
Sequence

55 -  

uauugcuuaagaauacgcguag

 - 76

Get sequence
Deep sequencing91464 reads, 5 experiments
Evidence experimental; Illumina [2]
Database links
Predicted targets

References

1
PMID:15592404 "Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution" International Chicken Genome Sequencing Consortium Nature. 432:695-716(2004).
2
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).