miRBase entry: gga-mir-302a

Stem-loop gga-mir-302a


Accession
MI0001211
Description
Gallus gallus gga-mir-302a precursor miRNA
Gene family
MIPF0000071; mir-302

Literature search
6 open access papers mention gga-mir-302a
(14 sentences)

Sequence

2 reads, 0 reads per million, 1 experiments
ccacaacuuaaauguggaugugcuugcuuuguucugaaaagaAAGUGCUUCCAUGUUUUAGUGAugg
(((..(((.(((((((((.((((((.((((.......)))).)))))).))))))))).)))..)))

Structure
   ca   u         u      g    gu 
cca  acu aaaugugga gugcuu cuuu  u
|||  ||| ||||||||| |||||| ||||  c
ggu  UGA UUUGUACCU CGUGAA gaaa  u
   AG   U         U      a    ag 


Annotation confidence Not enough data
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Comments
This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context
chr4: 57456844-57456910 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from gga-mir-302a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-302a

Accession MIMAT0001143
Description Gallus gallus gga-miR-302a mature miRNA
Sequence 43 - AAGUGCUUCCAUGUUUUAGUGA - 64
Evidence not_experimental

References

  1. PubMed ID: 15592404
    Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    "International Chicken Genome Sequencing Consortium"
    "Nature (2004) 432:695-716