miRBase entry: gga-mir-223

Stem-loop gga-mir-223


Accession
MI0001208
Description
Gallus gallus gga-mir-223 precursor miRNA
Gene family
MIPF0000067; mir-223

Literature search
17 open access papers mention gga-mir-223
(138 sentences)

Sequence

1328 reads, 20 reads per million, 5 experiments
cugcagugcagcacugcguguauuugacaagcugaguuugacacucagucuggcagagUGUCAGUUUGUCAAAUACCCCaagugaggcacuugcugagca
..(((((((..((((....((((((((((((((......(((((((.((...)).)))))))))))))))))))))....))))..)))).)))......

Structure
----cu   -    ag    gcgu              gaguuu       a  c 
      gca gugc  cacu    guauuugacaagcu      gacacuc gu  
      ||| ||||  ||||    ||||||||||||||      ||||||| || u
      cgu cacg  guga    CAUAAACUGUUUGA      CUGUgag cg  
acgagu   u    ga    aCCC              ------       a  g 


Annotation confidence Not enough data
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Genome context
chr4: 249565-249664 [+]

Database links

Mature gga-miR-223

Accession MIMAT0001140
Description Gallus gallus gga-miR-223 mature miRNA
Sequence 59 - UGUCAGUUUGUCAAAUACCCC - 79
Evidence experimental
cloned [2]
Database links
Predicted targets

References

  1. PubMed ID: 15592404
    Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    "International Chicken Genome Sequencing Consortium"
    "Nature (2004) 432:695-716


  2. "McBride D, Carre W, Law A, Clinton M"
    (None) None: