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miRBase |
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Stem-loop sequence gga-mir-215 |
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Accession | MI0001203 (change log) | |||||
Description | Gallus gallus miR-215 stem-loop | |||||
Gene family | MIPF0000063; mir-192 | |||||
Literature search |
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11 open access papers mention gga-mir-215 | |||||
Stem-loop |
uc a cu uc a a a - u acu uuuc 5' agua gaa ggug cagga a ug ccuau gaa ugacag gc a |||| ||| |||| ||||| | || ||||| ||| |||||| || a 3' ucau cuu ucac gucuu u ac ggaua cuu acuguc cg a -u c -u gu a a c u u --- ugua |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Comments |
This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken. |
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence gga-miR-215-5p |
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Accession | MIMAT0001134 |
Sequence |
26 - augaccuaugaauugacagac - 46 |
Deep sequencing | 9557 reads, 5 experiments |
Evidence | experimental; Illumina [2] |
Predicted targets |
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Mature sequence gga-miR-215-3p |
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Accession | MIMAT0026514 |
Sequence |
62 - ccugucauuucuauaggccaaua - 84 |
Evidence | experimental; Illumina [2] |
Predicted targets |
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References |
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1 |
PMID:15592404
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"
Nature. 432:695-716(2004).
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2 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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