Accession
MI0001166
Description
Gallus gallus
gga-mir-29a precursor miRNA
Gene family
MIPF0000009;
mir-29
Literature search
16 open access papers mention gga-mir-29a
(32 sentences)
(32 sentences)
Sequence
52550
reads,
670
reads per million, 5 experiments
accccuuuagaggaugaCUGAUUUCUUUUGGUGUUCAGAgucaauaauauuuucUAGCACCAUUUGAAAUCGGUUauagugauugggga
.((((.(((....((((((((((((...(((((((.((((...........)))))))))))...))))))))))))..)))..)))).
.((((.(((....((((((((((((...(((((((.((((...........)))))))))))...))))))))))))..)))..)))).
Structure
a -u gagg UUU C ucaa cccc uua augaCUGAUUUC UGGUGUU AGAg u |||| ||| |||||||||||| ||||||| |||| a gggg agu uaUUGGCUAAAG ACCACGA Ucuu a a uu --ga UUU - uuau
Annotation confidence
High
Do you think this miRNA is real?
Comments
This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.
Genome context
chr1: 3434776-3434864 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from gga-mir-29a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gga-miR-29a-3p
| Accession | MIMAT0001096 |
| Description | Gallus gallus gga-miR-29a-3p mature miRNA |
| Sequence | 55 - UAGCACCAUUUGAAAUCGGUU - 75 |
| Evidence |
experimental
Illumina [2] |
| Database links |
|
| Predicted targets |
|
Mature gga-miR-29a-5p
| Accession | MIMAT0026487 |
| Description | Gallus gallus gga-miR-29a-5p mature miRNA |
| Sequence | 18 - CUGAUUUCUUUUGGUGUUCAGA - 39 |
| Evidence |
experimental
Illumina [2] |
| Database links |
|
| Predicted targets |
|
References
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