Stem-loop sequence osa-MIR169b

AccessionMI0001117 (change log)
DescriptionOryza sativa miR169b stem-loop
Gene family MIPF0000037; MIR169_2
Literature search

60 open access papers mention osa-MIR169b
(318 sentences)

        ga   c         ug         uac    au     uu  aagguacuauaugu 
5' gaacg  aug agccaagga  acuugccgg   gugu  gcaug  uc              g
   |||||  ||| |||||||||  |||||||||   ||||  |||||  ||               
3' cuugu  ugc ucgguuccu  ugaacggcc   uaca  cguac  ag              c
        uc   a         gu         uuu    gu     cu  auuuugucaacccc 
Get sequence
Deep sequencing
5784 reads, 3.7e+03 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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This sequence is a predicted paralogue of the previously identified miR169 family [1]. It is predicted to target mRNAs coding for the CCAAT Binding Factor (CBF) and HAP2-like transcription factors.

Genome context
Coordinates (MSU7) Overlapping transcripts
Chr6: 27295908-27296035 [-]
Database links

Mature sequence osa-miR169b

Accession MIMAT0001047

11 - 


 - 31

Get sequence
Deep sequencing5757 reads, 2 experiments
Evidence by similarity; MI0000212
Database links