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miRBase |
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Stem-loop sequence ath-MIR402 |
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Accession | MI0001071 (change log) | ||||
Description | Arabidopsis thaliana miR402 stem-loop | ||||
Gene family | MIPF0001123; MIR402 | ||||
Literature search |
5 open access papers mention ath-MIR402 | ||||
Stem-loop |
cguggua - -g u u ccuuu uuaacccauauuuuc c u acaucu - --a gucauuuuucugaaaucuucuugccucaauuuccaacagcagauucaucuu 5' gauaa guuu agu gcauaguggcag cuu guuug augauucgagg cuau aaaccucuguu gcu uuuugaa aguu u ||||| |||| ||| |||||||||||| ||| ||||| ||||||||||| |||| ||||||||||| ||| ||||||| |||| c 3' cuauu caaa uca cguaucaucguc gag caaac uacuaagcucc gaua uuuggggauaa cga aaagcuu ucag a ----aaa u ag u u ----- -------------ua a - aauuuc u cag aauuaaagaaggguggaguaaaaaagauaguuuuugauugccuaguagguu |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence ath-miR402 |
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Accession | MIMAT0001003 |
Sequence |
67 - uucgaggccuauuaaaccucug - 88 |
Evidence | experimental; cloned [1], Northern [1], MPSS [2], 454 [3] |
References |
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1 |
PMID:15258262
"Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis"
Plant Cell. 16:2001-2019(2004).
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2 |
PMID:16954541
"MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant"
Genome Res. 16:1276-1288(2006).
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3 |
PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"
Genes Dev. 20:3407-3425(2006).
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