Stem-loop sequence osa-MIR395r

Accession

MI0001040 (change log)

Description

Oryza sativa miR395r stem-loop

Stem-loop

   uuau   -        c         c      ---gc  a         --a        -ug   -----    cc 
5'     cca cuggaguu uccucaaac acuuca     ag uagcuagcu   ggccucau   cau     ugca  a
       ||| |||||||| ||||||||| ||||||     || |||||||||   ||||||||   |||     ||||  c
3'     ggu ggccucaa agggguuug ugaagu     uc gucgauuga   ccggggua   gua     acgu  u
   -aac   u        -         -      gauau  -         aaa        cga   ucaau    ug 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (MSU7): Chr4: 32622811-32622878 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from osa-MIR395r

• osa-MIR395m: Chr4: 32621993-32622112 [+]
• osa-MIR395n: Chr4: 32622243-32622308 [+]
• osa-MIR395o: Chr4: 32622381-32622449 [+]
• osa-MIR395p: Chr4: 32622525-32622592 [+]
• osa-MIR395q: Chr4: 32622668-32622735 [+]
• osa-MIR395r: Chr4: 32622811-32622878 [+]
• osa-MIR395s: Chr4: 32622943-32623028 [+]
• osa-MIR395x: Chr4: 32623067-32623162 [+]

Database links

• miRBase Tracker:MI0001040