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miRBase |
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Stem-loop sequence ath-MIR391 |
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Accession | MI0001002 (change log) | ||||
Description | Arabidopsis thaliana miR391 stem-loop | ||||
Gene family | MIPF0001151; MIR391 | ||||
Literature search |
3 open access papers mention ath-MIR391 | ||||
Stem-loop |
-- cacau g ---- cu u a g u aac a - au u c g c -----cu 5' uaga gugauua acaa ugg ucuug ucu cu u gu uuaa ugca aua aag uugcu cg aggagagaua cg caucac cuucu |||| ||||||| |||| ||| ||||| ||| || | || |||| |||| ||| ||| ||||| || |||||||||| || |||||| |||| a 3' aucu cacuaau uguu acu ggaac aga ga g ca aauu acgu uau uuc aacga gc uccucucuau gc guggug gaaga cc -aacu g uuau -u - - g u -cu a a cu u a g a aucaauu |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence ath-miR391-5p |
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Accession | MIMAT0000933 |
Previous IDs | ath-miR391 |
Sequence |
68 - uucgcaggagagauagcgcca - 88 |
Evidence | experimental; cloned [1], 454 [2], Northern [2], Illumina [3] |
Mature sequence ath-miR391-3p |
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Accession | MIMAT0031904 |
Sequence |
119 - acgguaucucuccuacguagc - 139 |
Evidence | not experimental |
References |
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1 |
PMID:16040653
"Expression of Arabidopsis MIRNA genes"
Plant Physiol. 138:2145-2154(2005).
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2 |
PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"
Genes Dev. 20:3407-3425(2006).
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3 |
PMID:19815687
"Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis"
J Exp Bot. 61:165-177(2010).
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