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miRBase |
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Stem-loop sequence rno-mir-219a-2 |
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Accession | MI0000960 (change log) | |||||
Description | Rattus norvegicus miR-219a-2 stem-loop | |||||
Gene family | MIPF0000044; mir-219 | |||||
Literature search |
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29 open access papers mention rno-mir-219a-2 | |||||
Stem-loop |
acuca c u u aa uac a c 5' ggggcuu accac gau gucca cgcaauucuug g gu u ||||||| ||||| ||| ||||| ||||||||||| | || g 3' ccucgag uggug cua caggu guguuaagagc c cg c ---gg u u - cg caa - g |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence rno-miR-219a-5p |
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Accession | MIMAT0000889 |
Previous IDs | rno-miR-219 |
Sequence |
19 - ugauuguccaaacgcaauucu - 39 |
Deep sequencing | 64975 reads, 372 experiments |
Evidence | experimental; cloned [1], SOLiD [2] |
Predicted targets |
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Mature sequence rno-miR-219a-2-3p |
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Accession | MIMAT0005446 |
Sequence |
62 - agaauuguggcuggacaucugu - 83 |
Deep sequencing | 213455 reads, 266 experiments |
Evidence | experimental; cloned [1], SOLiD [2] |
Predicted targets |
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References |
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1 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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2 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
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