miRBase entry: hsa-mir-302d

Stem-loop hsa-mir-302d


Accession
MI0000774
Symbol
HGNC: MIR302D
Description
Homo sapiens hsa-mir-302d precursor miRNA
Gene family
MIPF0000071; mir-302

Literature search
182 open access papers mention hsa-mir-302d
(929 sentences)

Sequence

33 reads, 4 reads per million, 9 experiments
ccucuACUUUAACAUGGAGGCACUUGCugugacaugacaaaaaUAAGUGCUUCCAUGUUUGAGUGUgg
((..(((((.((((((((((((((((.(((......)))....)))))))))))))))).))))).))

Structure
  uc     U                ---C   ga 
cc  uACUU AACAUGGAGGCACUUG    ugu  c
||  ||||| ||||||||||||||||    |||   
gg  GUGAG UUGUACCUUCGUGAAU    aca  a
  -U     U                aaaa   gu 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Human miR-302a (MIR:MI0000738), miR-302b (MIR:MI0000772), miR-302c (MIR:MI0000773), miR-302d (MIR:MI0000774) and miR-367 (MIR:MI0000775) are clustered on chromosome 4.

Genome context
chr4: 112648004-112648071 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from hsa-mir-302d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-302d-5p

Accession MIMAT0004685
Description Homo sapiens hsa-miR-302d-5p mature miRNA
Sequence 6 - ACUUUAACAUGGAGGCACUUGC - 27
Evidence experimental
cloned [2]

Mature hsa-miR-302d-3p

Accession MIMAT0000718
Description Homo sapiens hsa-miR-302d-3p mature miRNA
Sequence 44 - UAAGUGCUUCCAUGUUUGAGUGU - 66
Evidence experimental
cloned [1-2], Northern [1]
Database links
Predicted targets

References

  1. PubMed ID: 15183728
    Human embryonic stem cells express a unique set of microRNAs
    "Suh MR, Lee Y, Kim JY, Kim SK, Moon SH, Lee JY, Cha KY, Chung HM, Yoon HS, Moon SY, Kim VN, Kim KS"
    "Dev Biol (2004) 270:488-498

  2. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414