Stem-loop sequence mmu-mir-30c-2

AccessionMI0000548 (change log)
Symbol MGI:Mir30c-2
DescriptionMus musculus miR-30c-2 stem-loop
Gene family MIPF0000005; mir-30
Literature search

212 open access papers mention mmu-mir-30c-2
(1271 sentences)

      u a    uauu       u   aca         gugaaa 
5' gag g caga    guaaaca ccu   cucucagcu      a
   ||| | ||||    ||||||| |||   |||||||||       
3' uuc c gucu    cauuugu gga   gagggucga      g
      - -    cucu       c   --a         aagaau 
Get sequence
Deep sequencing
692452 reads, 1.96e+03 reads per million, 107 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?

miR-30c was cloned and mapped to chromosome 4 in reference [1] (MI0000547). A search of more recent mouse genome assemblies suggests the presence of a second locus encoding miR-30c on chromosome 1, represented by this entry.

Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chr1: 23291701-23291784 [+]
OTTMUST00000114071 ; RP23-28L24.7-001; exon 1
ENSMUST00000182303 ; Gm27028-001; exon 1
Database links

Mature sequence mmu-miR-30c-5p

Accession MIMAT0000514
Previous IDsmmu-miR-30c

14 - 


 - 36

Get sequence
Deep sequencing1298540 reads, 107 experiments
Evidence experimental; cloned [1-4], Illumina [5-6]
Database links
Predicted targets

Mature sequence mmu-miR-30c-2-3p

Accession MIMAT0005438
Previous IDsmmu-miR-30c-2*

54 - 


 - 75

Get sequence
Deep sequencing43291 reads, 104 experiments
Evidence experimental; cloned [4], Illumina [5-6]
Database links
Predicted targets


PMID:12007417 "Identification of tissue-specific microRNAs from mouse" Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T Curr Biol. 12:735-739(2002).
PMID:15538371 "A pancreatic islet-specific microRNA regulates insulin secretion" Poy MN, Eliasson L, Krutzfeldt J, Kuwajima S, Ma X, Macdonald PE, Pfeffer S, Tuschl T, Rajewsky N, Rorsman P, Stoffel M Nature. 432:226-230(2004).
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
PMID:20215419 "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing" Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A Mol Hum Reprod. 16:463-471(2010).
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).