Accession
MI0000417
Description
Drosophila melanogaster
dme-mir-125 precursor miRNA
Gene family
MIPF0000033;
mir-10
Literature search
20 open access papers mention dme-mir-125
(195 sentences)
(195 sentences)
Sequence
79053
reads,
2646
reads per million, 49 experiments
gacaugugcaaauguuuguauggcugauUCCCUGAGACCCUAACUUGUGAcuuuuaauaccaguuucACAAGUUUUGAUCUCCGGUAUuggacgcaaacuugcugauguu
(((((..((((..((((((....(((((..((.((((.(..(((((((((...............)))))))))..).)))).)).)))))..))))))))))..)))))
(((((..((((..((((((....(((((..((.((((.(..(((((((((...............)))))))))..).)))).)).)))))..))))))))))..)))))
Structure
gu au augg UC U C CU cuuuua
gacau gcaa guuugu cugau CC GAGA C AACUUGUGA a
||||| |||| |||||| ||||| || |||| | ||||||||| u
uugua cguu caaacg gguUA GG CUCU G UUGAACAcu a
gu -- --ca -U C A UU uugacc
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2L: 18472315-18472424 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dme-mir-125
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-125-5p
| Accession | MIMAT0000397 |
| Description | Drosophila melanogaster dme-miR-125-5p mature miRNA |
| Sequence | 29 - UCCCUGAGACCCUAACUUGUGA - 50 |
| Evidence |
experimental
Northern [1-2], 454 [3-4], Illumina [4] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-125-3p
| Accession | MIMAT0020831 |
| Description | Drosophila melanogaster dme-miR-125-3p mature miRNA |
| Sequence | 68 - ACAAGUUUUGAUCUCCGGUAU - 88 |
| Evidence | not_experimental |
| Database links |
|
References
|
