miRBase entry: mmu-mir-295

Stem-loop mmu-mir-295


Accession
MI0000393
Symbol
MGI: Mir295
Description
Mus musculus mmu-mir-295 precursor miRNA
Gene family
MIPF0000068; mir-290

Literature search
23 open access papers mention mmu-mir-295
(134 sentences)

Sequence

80693 reads, 1759 reads per million, 62 experiments
ggugagACUCAAAUGUGGGGCACACUUCuggacuguacauagAAAGUGCUACUACUUUUGAGUCUcucc
((.((((((((((.(((((((((..(((((.........))))).))))).)))).)))))))))).))

Structure
  u          U    -     AC     gac 
gg gagACUCAAA GUGG GGCAC  UUCug   u
|| |||||||||| |||| |||||  |||||   g
cc cUCUGAGUUU CAUC UCGUG  AAgau   u
  u          U    A     -A     aca 


Annotation confidence High
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Genome context
chr7: 3220773-3220841 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from mmu-mir-295
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-295-5p

Accession MIMAT0004575
Description Mus musculus mmu-miR-295-5p mature miRNA
Sequence 7 - ACUCAAAUGUGGGGCACACUUC - 28
Evidence experimental
cloned [2], Illumina [3-4]
Database links
Predicted targets

Mature mmu-miR-295-3p

Accession MIMAT0000373
Description Mus musculus mmu-miR-295-3p mature miRNA
Sequence 43 - AAAGUGCUACUACUUUUGAGUCU - 65
Evidence experimental
cloned [1-2], Northern [1], Illumina [3-4]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 12919684
    Embryonic stem cell-specific MicroRNAs
    "Houbaviy HB, Murray MF, Sharp PA"
    "Dev Cell (2003) 5:351-358

  3. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  4. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009